IL_5MEI_275

3D structure

PDB id

5MEI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Agelastatin A bound to the 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GAAAAAAUUA*UAUAUUAGC

Length

19 nucleotides

Bulged bases

5MEI|1|A|U|794

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MEI|1|A|G|751
5MEI|1|A|A|752
5MEI|1|A|A|753
5MEI|1|A|A|754
5MEI|1|A|A|755
5MEI|1|A|A|756
5MEI|1|A|A|757
5MEI|1|A|U|758
5MEI|1|A|U|759
5MEI|1|A|A|760
*
5MEI|1|A|U|790
5MEI|1|A|A|791
5MEI|1|A|U|792
5MEI|1|A|A|793
5MEI|1|A|U|794
5MEI|1|A|U|795
5MEI|1|A|A|796
5MEI|1|A|G|797
5MEI|1|A|C|798

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain F

40S ribosomal protein S4-A

Chain K

40S ribosomal protein S9-A

Chain M

40S ribosomal protein S11-A

Chain X

40S ribosomal protein S22-A