IL_5ML7_006

3D structure

PDB id

5ML7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF L1-STALK FRAGMENT OF 23S rRNA FROM HALOARCULA MARISMORTUI

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GUGCAGCAUAG*CC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32056.1

Basepair signature

cWW-L-cWW-L-L-tWH-R-L-R-L

Number of instances in this motif group

3

Unit IDs

5ML7|1|B|G|2151
5ML7|1|B|U|2152
5ML7|1|B|G|2153
5ML7|1|B|C|2154
5ML7|1|B|A|2155
5ML7|1|B|G|2156
5ML7|1|B|C|2157
5ML7|1|B|A|2158
5ML7|1|B|U|2159
5ML7|1|B|A|2160
5ML7|1|B|G|2161
*
5ML7|1|B|C|2223
5ML7|1|B|C|2224

Current chains

Chain B

23S ribosomal RNA

Nearby chains