IL_5MMI_007
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGUAGUAG*CGAAAUG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MMI_007 not in the Motif Atlas
- Homologous match to IL_4WF9_009
- Geometric discrepancy: 0.1137
- The information below is about IL_4WF9_009
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.3
- Basepair signature
- cWW-cWW-tSH-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
5MMI|1|A|C|223
5MMI|1|A|G|224
5MMI|1|A|U|225
5MMI|1|A|A|226
5MMI|1|A|G|227
5MMI|1|A|U|228
5MMI|1|A|A|229
5MMI|1|A|G|230
*
5MMI|1|A|C|238
5MMI|1|A|G|239
5MMI|1|A|A|240
5MMI|1|A|A|241
5MMI|1|A|A|242
5MMI|1|A|U|243
5MMI|1|A|G|244
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L35, chloroplastic
- Chain M
- plastid ribosomal protein uL15c
Coloring options: