IL_5MMI_015
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAC*GAGUGAAAAGAAC
- Length
- 17 nucleotides
- Bulged bases
- 5MMI|1|A|A|519
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MMI_015 not in the Motif Atlas
- Homologous match to IL_5J7L_255
- Geometric discrepancy: 0.0993
- The information below is about IL_5J7L_255
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_81516.2
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 6
Unit IDs
5MMI|1|A|G|493
5MMI|1|A|A|494
5MMI|1|A|A|495
5MMI|1|A|C|496
*
5MMI|1|A|G|507
5MMI|1|A|A|508
5MMI|1|A|G|509
5MMI|1|A|U|510
5MMI|1|A|G|511
5MMI|1|A|A|512
5MMI|1|A|A|513
5MMI|1|A|A|514
5MMI|1|A|A|516
5MMI|1|A|G|517
5MMI|1|A|A|518
5MMI|1|A|A|519
5MMI|1|A|C|520
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain T
- 50S ribosomal protein L22, chloroplastic
- Chain V
- plastid ribosomal protein uL24c
Coloring options: