IL_5MMI_050
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUGAGUAA*UGAAAUA
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MMI_050 not in the Motif Atlas
- Homologous match to IL_7RQB_049
- Geometric discrepancy: 0.0841
- The information below is about IL_7RQB_049
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.7
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
5MMI|1|A|U|1283
5MMI|1|A|U|1284
5MMI|1|A|G|1285
5MMI|1|A|A|1286
5MMI|1|A|G|1287
5MMI|1|A|U|1288
5MMI|1|A|A|1289
5MMI|1|A|A|1290
*
5MMI|1|A|U|2025
5MMI|1|A|G|2026
5MMI|1|A|A|2027
5MMI|1|A|A|2028
5MMI|1|A|A|2029
5MMI|1|A|U|2030
5MMI|1|A|A|2031
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L32, chloroplastic
- Chain E
- plastid ribosomal protein uL4c
- Chain T
- 50S ribosomal protein L22, chloroplastic
Coloring options: