IL_5MMI_126

3D structure

PDB id

5MMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the chloroplast ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCAGAGACAG*UCGAGC

Length

16 nucleotides

Bulged bases

5MMI|1|A|A|1074

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MMI|1|A|G|1070
5MMI|1|A|C|1071
5MMI|1|A|A|1072
5MMI|1|A|G|1073
5MMI|1|A|A|1074
5MMI|1|A|G|1075
5MMI|1|A|A|1076
5MMI|1|A|C|1077
5MMI|1|A|A|1078
5MMI|1|A|G|1079
*
5MMI|1|A|U|1136
5MMI|1|A|C|1137
5MMI|1|A|G|1138
5MMI|1|A|A|1139
5MMI|1|A|G|1140
5MMI|1|A|C|1141

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 5

50S ribosomal protein L36, chloroplastic

Chain G

plastid ribosomal protein uL6c

Chain I

plastid ribosomal protein uL10c