IL_5MMI_129

3D structure

PDB id

5MMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the chloroplast ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUGCGCAGCUUAGGU*ACUCUG

Length

21 nucleotides

Bulged bases

5MMI|1|A|C|2125, 5MMI|1|A|A|2128, 5MMI|1|A|C|2130, 5MMI|1|A|U|2132, 5MMI|1|A|A|2133

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MMI|1|A|C|2122
5MMI|1|A|U|2123
5MMI|1|A|G|2124
5MMI|1|A|C|2125
5MMI|1|A|G|2126
5MMI|1|A|C|2127
5MMI|1|A|A|2128
5MMI|1|A|G|2129
5MMI|1|A|C|2130
5MMI|1|A|U|2131
5MMI|1|A|U|2132
5MMI|1|A|A|2133
5MMI|1|A|G|2134
5MMI|1|A|G|2135
5MMI|1|A|U|2136
*
5MMI|1|A|A|2190
5MMI|1|A|C|2191
5MMI|1|A|U|2192
5MMI|1|A|C|2193
5MMI|1|A|U|2194
5MMI|1|A|G|2195

Current chains

Chain A

23S ribosomal RNA

Nearby chains