IL_5MQ0_007

3D structure

PDB id

5MQ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a spliceosome remodeled for exon ligation

Experimental method

ELECTRON MICROSCOPY

Resolution

4.17 Å

Loop

Sequence

CAGAUCAAU*ACAGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MQ0|1|5|C|12
5MQ0|1|5|A|13
5MQ0|1|5|G|14
5MQ0|1|5|A|15
5MQ0|1|5|U|16
5MQ0|1|5|C|17
5MQ0|1|5|A|18
5MQ0|1|5|A|19
5MQ0|1|5|U|20
*
5MQ0|1|5|A|132
5MQ0|1|5|C|133
5MQ0|1|5|A|134
5MQ0|1|5|G|135
5MQ0|1|5|G|136

Current chains

Chain 5

Saccharomyces cerevisiae strain WI_C_MBSP_4 chromosome VII sequence

Nearby chains

Chain h

Small nuclear ribonucleoprotein Sm D1