IL_5MRC_023

3D structure

PDB id

5MRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.25 Å

Loop

Sequence

CA*UCG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5MRC_023 not in the Motif Atlas

Geometric match to IL_7TZS_003

Geometric discrepancy: 0.1744

The information below is about IL_7TZS_003

Detailed Annotation

Minor groove platform related

Broad Annotation

Minor groove platform related

Motif group

IL_34520.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

61

Unit IDs

5MRC|1|A|C|785
5MRC|1|A|A|786
*
5MRC|1|A|U|839
5MRC|1|A|C|840
5MRC|1|A|G|841

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain E

uL5m

Chain K

uL16m

Chain c

mL60