IL_5MRC_082

3D structure

PDB id

5MRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.25 Å

Loop

Sequence

CAAAU*AUAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5MRC_082 not in the Motif Atlas

Geometric match to IL_7RQB_075

Geometric discrepancy: 0.1723

The information below is about IL_7RQB_075

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

5MRC|1|A|C|2902
5MRC|1|A|A|2903
5MRC|1|A|A|2904
5MRC|1|A|A|2905
5MRC|1|A|U|2906
*
5MRC|1|A|A|3112
5MRC|1|A|U|3113
5MRC|1|A|A|3114
5MRC|1|A|A|3115
5MRC|1|A|G|3116

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain C

uL3m

Chain H

uL13m