IL_5MRC_126

3D structure

PDB id

5MRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.25 Å

Loop

Sequence

GGUUA*UUUC

Length

9 nucleotides

Bulged bases

5MRC|1|aa|G|991

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5MRC_126 not in the Motif Atlas

Geometric match to IL_5TBW_128

Geometric discrepancy: 0.1736

The information below is about IL_5TBW_128

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_67085.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

55

Unit IDs

5MRC|1|aa|G|990
5MRC|1|aa|G|991
5MRC|1|aa|U|992
5MRC|1|aa|U|993
5MRC|1|aa|A|994
*
5MRC|1|aa|U|1456
5MRC|1|aa|U|1457
5MRC|1|aa|U|1458
5MRC|1|aa|C|1459

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain ZZ

mS37