IL_5MRC_140

3D structure

PDB id

5MRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.25 Å

Loop

Sequence

UCA*UACA

Length

7 nucleotides

Bulged bases

5MRC|1|aa|C|1468, 5MRC|1|aa|C|1595

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5MRC_140 not in the Motif Atlas

Geometric match to IL_5J7L_058

Geometric discrepancy: 0.1332

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

5MRC|1|aa|U|1467
5MRC|1|aa|C|1468
5MRC|1|aa|A|1469
*
5MRC|1|aa|U|1593
5MRC|1|aa|A|1594
5MRC|1|aa|C|1595
5MRC|1|aa|A|1596

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain 11

mS38