IL_5MRC_157

3D structure

PDB id

5MRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.25 Å

Loop

Sequence

UAU*AUA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5MRC_157 not in the Motif Atlas

Geometric match to IL_3D0M_001

Geometric discrepancy: 0.1578

The information below is about IL_3D0M_001

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

5MRC|1|A|U|3163
5MRC|1|A|A|3164
5MRC|1|A|U|3165
*
5MRC|1|A|A|3240
5MRC|1|A|U|3241
5MRC|1|A|A|3242

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain C

uL3m

Chain L

bL17m

Chain M

bL19m