IL_5MRE_099

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CG*UAUG

Length

6 nucleotides

Bulged bases

5MRE|1|aa|A|100, 5MRE|1|aa|U|101

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5MRE_099 not in the Motif Atlas

Geometric match to IL_4YAZ_007

Geometric discrepancy: 0.1761

The information below is about IL_4YAZ_007

Detailed Annotation

Multiple bulged bases

Broad Annotation

Multiple bulged bases

Motif group

IL_71421.2

Basepair signature

cWW-cWW

Number of instances in this motif group

35

Unit IDs

5MRE|1|aa|C|74
5MRE|1|aa|G|75
*
5MRE|1|aa|U|99
5MRE|1|aa|A|100
5MRE|1|aa|U|101
5MRE|1|aa|G|102

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain 22

mS41