IL_5MRE_162
3D structure
- PDB id
- 5MRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- UACAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 5MRE|1|aa|C|1101
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MRE_162 not in the Motif Atlas
- Homologous match to IL_4LFB_044
- Geometric discrepancy: 0.2577
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
5MRE|1|aa|U|1099
5MRE|1|aa|A|1100
5MRE|1|aa|C|1101
5MRE|1|aa|A|1102
5MRE|1|aa|U|1103
*
5MRE|1|aa|A|1236
5MRE|1|aa|U|1237
5MRE|1|aa|G|1238
Current chains
- Chain aa
- 15S ribosomal RNA
Nearby chains
- Chain CC
- uS3m
- Chain JJ
- uS10m
- Chain NN
- uS14m
- Chain XX
- mS33
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