IL_5MRF_135
3D structure
- PDB id
- 5MRF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.97 Å
Loop
- Sequence
- UAUA*UUAAUA
- Length
- 10 nucleotides
- Bulged bases
- 5MRF|1|aa|U|1291, 5MRF|1|aa|A|1320, 5MRF|1|aa|U|1321
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MRF_135 not in the Motif Atlas
- Geometric match to IL_4LFB_052
- Geometric discrepancy: 0.2184
- The information below is about IL_4LFB_052
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_08849.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
5MRF|1|aa|U|1289
5MRF|1|aa|A|1290
5MRF|1|aa|U|1291
5MRF|1|aa|A|1292
*
5MRF|1|aa|U|1317
5MRF|1|aa|U|1318
5MRF|1|aa|A|1319
5MRF|1|aa|A|1320
5MRF|1|aa|U|1321
5MRF|1|aa|A|1322
Current chains
- Chain aa
- 15S ribosomal RNA
Nearby chains
- Chain CC
- uS3m
- Chain JJ
- uS10m
- Chain NN
- uS14m
- Chain XX
- mS33
- Chain YY
- mS35
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