IL_5MRF_159
3D structure
- PDB id
- 5MRF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.97 Å
Loop
- Sequence
- UUAUU*AUCA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MRF_159 not in the Motif Atlas
- Homologous match to IL_6CZR_170
- Geometric discrepancy: 0.3705
- The information below is about IL_6CZR_170
- Detailed Annotation
- UAA/GAN variation
- Broad Annotation
- UAA/GAN variation
- Motif group
- IL_77691.4
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
5MRF|1|aa|U|1499
5MRF|1|aa|U|1500
5MRF|1|aa|A|1501
5MRF|1|aa|U|1502
5MRF|1|aa|U|1503
*
5MRF|1|aa|A|1559
5MRF|1|aa|U|1560
5MRF|1|aa|C|1561
5MRF|1|aa|A|1562
Current chains
- Chain aa
- 15S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain M
- bL19m
- Chain OO
- uS15m
Coloring options: