IL_5MY1_070

3D structure

PDB id

5MY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli expressome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

CAC*GAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5MY1_070 not in the Motif Atlas

Geometric match to IL_8B0X_178

Geometric discrepancy: 0.3361

The information below is about IL_8B0X_178

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75527.2

Basepair signature

cWW-cWW-cSH-cWW

Number of instances in this motif group

10

Unit IDs

5MY1|1|A|C|1407
5MY1|1|A|A|1408
5MY1|1|A|C|1409
*
5MY1|1|A|G|1491
5MY1|1|A|A|1492
5MY1|1|A|A|1493
5MY1|1|A|G|1494

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S12