IL_5NG8_268
3D structure
- PDB id
- 5NG8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.76 Å
Loop
- Sequence
- UGGAAG*UGGAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5NG8_268 not in the Motif Atlas
- Geometric match to IL_4WF9_108
- Geometric discrepancy: 0.1001
- The information below is about IL_4WF9_108
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48489.1
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
5NG8|1|BA|U|2867
5NG8|1|BA|G|2868
5NG8|1|BA|G|2869
5NG8|1|BA|A|2870
5NG8|1|BA|A|2871
5NG8|1|BA|G|2872
*
5NG8|1|BA|U|2885
5NG8|1|BA|G|2886
5NG8|1|BA|G|2887
5NG8|1|BA|A|2888
5NG8|1|BA|G|2889
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BL
- 50S ribosomal protein L17
- Chain BN
- 50S ribosomal protein L19
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