IL_5NGM_049

3D structure

PDB id

5NGM (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.9S structure of the 70S ribosome composing the S. aureus 100S complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUAAUCGUUUUAAUC*GAUAGAAAAU

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NGM|1|AA|A|1447
5NGM|1|AA|U|1448
5NGM|1|AA|A|1449
5NGM|1|AA|A|1450
5NGM|1|AA|U|1451
5NGM|1|AA|C|1452
5NGM|1|AA|G|1453
5NGM|1|AA|U|1454
5NGM|1|AA|U|1455
5NGM|1|AA|U|1456
5NGM|1|AA|U|1457
5NGM|1|AA|A|1458
5NGM|1|AA|A|1459
5NGM|1|AA|U|1460
5NGM|1|AA|C|1461
*
5NGM|1|AA|G|1627
5NGM|1|AA|A|1628
5NGM|1|AA|U|1629
5NGM|1|AA|A|1630
5NGM|1|AA|G|1631
5NGM|1|AA|A|1632
5NGM|1|AA|A|1633
5NGM|1|AA|A|1634
5NGM|1|AA|A|1635
5NGM|1|AA|U|1636

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains