IL_5NGM_052

3D structure

PDB id

5NGM (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.9S structure of the 70S ribosome composing the S. aureus 100S complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUAGG*UGAUUU

Length

11 nucleotides

Bulged bases

5NGM|1|AA|U|1602

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NGM|1|AA|A|1481
5NGM|1|AA|U|1482
5NGM|1|AA|A|1483
5NGM|1|AA|G|1484
5NGM|1|AA|G|1485
*
5NGM|1|AA|U|1598
5NGM|1|AA|G|1599
5NGM|1|AA|A|1600
5NGM|1|AA|U|1601
5NGM|1|AA|U|1602
5NGM|1|AA|U|1603

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains