IL_5NGM_078

3D structure

PDB id

5NGM (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.9S structure of the 70S ribosome composing the S. aureus 100S complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUUGAAACGUGAG*CUUACGUGGAG

Length

25 nucleotides

Bulged bases

5NGM|1|AA|U|2158, 5NGM|1|AA|U|2159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NGM|1|AA|C|2156
5NGM|1|AA|U|2157
5NGM|1|AA|U|2158
5NGM|1|AA|U|2159
5NGM|1|AA|G|2160
5NGM|1|AA|A|2161
5NGM|1|AA|A|2162
5NGM|1|AA|A|2163
5NGM|1|AA|C|2164
5NGM|1|AA|G|2165
5NGM|1|AA|U|2166
5NGM|1|AA|G|2167
5NGM|1|AA|A|2168
5NGM|1|AA|G|2169
*
5NGM|1|AA|C|2176
5NGM|1|AA|U|2177
5NGM|1|AA|U|2178
5NGM|1|AA|A|2179
5NGM|1|AA|C|2180
5NGM|1|AA|G|2181
5NGM|1|AA|U|2182
5NGM|1|AA|G|2183
5NGM|1|AA|G|2184
5NGM|1|AA|A|2185
5NGM|1|AA|G|2186

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains