IL_5NGM_079
3D structure
- PDB id
- 5NGM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.9S structure of the 70S ribosome composing the S. aureus 100S complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGC*GG
- Length
- 5 nucleotides
- Bulged bases
- 5NGM|1|AA|G|2230
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5NGM_079 not in the Motif Atlas
- Homologous match to IL_5J7L_331
- Geometric discrepancy: 0.5579
- The information below is about IL_5J7L_331
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
5NGM|1|AA|C|2229
5NGM|1|AA|G|2230
5NGM|1|AA|C|2231
*
5NGM|1|AA|G|2247
5NGM|1|AA|G|2248
Current chains
- Chain AA
- 23S Ribosomal RNA
Nearby chains
- Chain AC
- 50S ribosomal protein L2
- Chain AV
- 50S ribosomal protein L28
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