IL_5NGM_119

3D structure

PDB id

5NGM (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.9S structure of the 70S ribosome composing the S. aureus 100S complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAGUU*AAGG

Length

10 nucleotides

Bulged bases

5NGM|1|Aa|G|259

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NGM|1|Aa|C|256
5NGM|1|Aa|U|257
5NGM|1|Aa|A|258
5NGM|1|Aa|G|259
5NGM|1|Aa|U|260
5NGM|1|Aa|U|261
*
5NGM|1|Aa|A|281
5NGM|1|Aa|A|282
5NGM|1|Aa|G|283
5NGM|1|Aa|G|284

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Aq

30S ribosomal protein S17