IL_5NGM_154

3D structure

PDB id

5NGM (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.9S structure of the 70S ribosome composing the S. aureus 100S complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCAG*CAAAUC

Length

10 nucleotides

Bulged bases

5NGM|1|Aa|C|1266, 5NGM|1|Aa|A|1290

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NGM|1|Aa|G|1265
5NGM|1|Aa|C|1266
5NGM|1|Aa|A|1267
5NGM|1|Aa|G|1268
*
5NGM|1|Aa|C|1287
5NGM|1|Aa|A|1288
5NGM|1|Aa|A|1289
5NGM|1|Aa|A|1290
5NGM|1|Aa|U|1291
5NGM|1|Aa|C|1292

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ac

30S ribosomal protein S3

Chain Aj

30S ribosomal protein S10

Chain An

30S ribosomal protein S14 type Z