IL_5NJT_042

3D structure

PDB id

5NJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGACAAU*ACGUCCCCUUCGGGGGCA

Length

25 nucleotides

Bulged bases

5NJT|1|A|U|1040

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NJT|1|A|U|1012
5NJT|1|A|G|1013
5NJT|1|A|A|1014
5NJT|1|A|C|1015
5NJT|1|A|A|1016
5NJT|1|A|A|1017
5NJT|1|A|U|1018
*
5NJT|1|A|A|1031
5NJT|1|A|C|1032
5NJT|1|A|G|1033
5NJT|1|A|U|1034
5NJT|1|A|C|1035
5NJT|1|A|C|1036
5NJT|1|A|C|1037
5NJT|1|A|C|1038
5NJT|1|A|U|1039
5NJT|1|A|U|1040
5NJT|1|A|C|1041
5NJT|1|A|G|1042
5NJT|1|A|G|1043
5NJT|1|A|G|1044
5NJT|1|A|G|1045
5NJT|1|A|G|1046
5NJT|1|A|C|1047
5NJT|1|A|A|1048

Current chains

Chain A

16S ribosomal RNA

Nearby chains