IL_5NJT_154

3D structure

PDB id

5NJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAG*CAUCGGUGGGAUAC

Length

18 nucleotides

Bulged bases

5NJT|1|U|U|2196, 5NJT|1|U|U|2201

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NJT|1|U|G|2153
5NJT|1|U|G|2154
5NJT|1|U|A|2155
5NJT|1|U|G|2156
*
5NJT|1|U|C|2190
5NJT|1|U|A|2191
5NJT|1|U|U|2192
5NJT|1|U|C|2193
5NJT|1|U|G|2194
5NJT|1|U|G|2195
5NJT|1|U|U|2196
5NJT|1|U|G|2197
5NJT|1|U|G|2198
5NJT|1|U|G|2199
5NJT|1|U|A|2200
5NJT|1|U|U|2201
5NJT|1|U|A|2202
5NJT|1|U|C|2203

Current chains

Chain U

23S ribosomal RNA

Nearby chains