IL_5NJT_185

3D structure

PDB id

5NJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAAGAACAA*UUGACGGUAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NJT|1|A|G|454
5NJT|1|A|G|455
5NJT|1|A|A|456
5NJT|1|A|A|457
5NJT|1|A|G|458
5NJT|1|A|A|459
5NJT|1|A|A|460
5NJT|1|A|C|461
5NJT|1|A|A|462
5NJT|1|A|A|463
*
5NJT|1|A|U|488
5NJT|1|A|U|489
5NJT|1|A|G|490
5NJT|1|A|A|491
5NJT|1|A|C|492
5NJT|1|A|G|493
5NJT|1|A|G|494
5NJT|1|A|U|495
5NJT|1|A|A|496
5NJT|1|A|C|497

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain P

30S ribosomal protein S16