IL_5NJT_191

3D structure

PDB id

5NJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCAAGCAG*CUGUGAUG

Length

16 nucleotides

Bulged bases

5NJT|1|U|U|1570

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NJT|1|U|C|1514
5NJT|1|U|C|1515
5NJT|1|U|A|1516
5NJT|1|U|A|1517
5NJT|1|U|G|1518
5NJT|1|U|C|1519
5NJT|1|U|A|1520
5NJT|1|U|G|1521
*
5NJT|1|U|C|1564
5NJT|1|U|U|1565
5NJT|1|U|G|1566
5NJT|1|U|U|1567
5NJT|1|U|G|1568
5NJT|1|U|A|1569
5NJT|1|U|U|1570
5NJT|1|U|G|1571

Current chains

Chain U

23S ribosomal RNA

Nearby chains