IL_5NO3_077
3D structure
- PDB id
- 5NO3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate without uS3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.16 Å
Loop
- Sequence
- (5MC)AC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5NO3_077 not in the Motif Atlas
- Homologous match to IL_4LFB_070
- Geometric discrepancy: 0.4818
- The information below is about IL_4LFB_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31531.3
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 13
Unit IDs
5NO3|1|A|5MC|1407
5NO3|1|A|A|1408
5NO3|1|A|C|1409
*
5NO3|1|A|G|1491
5NO3|1|A|A|1492
5NO3|1|A|A|1493
5NO3|1|A|G|1494
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain Z
- Small ribosomal subunit biogenesis GTPase RsgA
Coloring options: