IL_5NP6_046
3D structure
- PDB id
- 5NP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S structure prior to bypassing
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUG*CC
- Length
- 5 nucleotides
- Bulged bases
- 5NP6|1|D|U|1049
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5NP6_046 not in the Motif Atlas
- Homologous match to IL_5J7L_046
- Geometric discrepancy: 0.1112
- The information below is about IL_5J7L_046
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
5NP6|1|D|G|1048
5NP6|1|D|U|1049
5NP6|1|D|G|1050
*
5NP6|1|D|C|1208
5NP6|1|D|C|1209
Current chains
- Chain D
- 16S ribosomal RNA
Nearby chains
- Chain Q
- 30S ribosomal protein S14
Coloring options: