IL_5NP6_106

3D structure

PDB id

5NP6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S structure prior to bypassing

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

5NP6|1|Y|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NP6|1|Y|C|1043
5NP6|1|Y|C|1044
5NP6|1|Y|C|1045
5NP6|1|Y|A|1046
5NP6|1|Y|G|1047
5NP6|1|Y|A|1048
5NP6|1|Y|C|1049
5NP6|1|Y|A|1050
5NP6|1|Y|G|1051
5NP6|1|Y|C|1052
*
5NP6|1|Y|G|1107
5NP6|1|Y|U|1108
5NP6|1|Y|C|1109
5NP6|1|Y|G|1110
5NP6|1|Y|A|1111
5NP6|1|Y|G|1112

Current chains

Chain Y

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L36

Chain 3

50S ribosomal protein L10

Chain e

50S ribosomal protein L6