IL_5NP6_114
3D structure
- PDB id
- 5NP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S structure prior to bypassing
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUAAG*CGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5NP6_114 not in the Motif Atlas
- Homologous match to IL_7A0S_048
- Geometric discrepancy: 0.1468
- The information below is about IL_7A0S_048
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- UAA/GAN
- Motif group
- IL_89021.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
5NP6|1|Y|C|1351
5NP6|1|Y|U|1352
5NP6|1|Y|A|1353
5NP6|1|Y|A|1354
5NP6|1|Y|G|1355
*
5NP6|1|Y|C|1376
5NP6|1|Y|G|1377
5NP6|1|Y|A|1378
5NP6|1|Y|U|1379
5NP6|1|Y|G|1380
Current chains
- Chain Y
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L34
- Chain a
- 50S ribosomal protein L2
Coloring options: