IL_5NP6_149

3D structure

PDB id

5NP6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S structure prior to bypassing

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUGAUGUGUAGGAUAG*CCUUUAA

Length

23 nucleotides

Bulged bases

5NP6|1|Y|U|2111, 5NP6|1|Y|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NP6|1|Y|U|2105
5NP6|1|Y|U|2106
5NP6|1|Y|G|2107
5NP6|1|Y|A|2108
5NP6|1|Y|U|2109
5NP6|1|Y|G|2110
5NP6|1|Y|U|2111
5NP6|1|Y|G|2112
5NP6|1|Y|U|2113
5NP6|1|Y|A|2114
5NP6|1|Y|G|2115
5NP6|1|Y|G|2116
5NP6|1|Y|A|2117
5NP6|1|Y|U|2118
5NP6|1|Y|A|2119
5NP6|1|Y|G|2120
*
5NP6|1|Y|C|2178
5NP6|1|Y|C|2179
5NP6|1|Y|U|2180
5NP6|1|Y|U|2181
5NP6|1|Y|U|2182
5NP6|1|Y|A|2183
5NP6|1|Y|A|2184

Current chains

Chain Y

23S ribosomal RNA

Nearby chains