IL_5NP6_186

3D structure

PDB id

5NP6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S structure prior to bypassing

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGGCAAG*CAACCCG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NP6|1|Y|C|873
5NP6|1|Y|G|874
5NP6|1|Y|G|875
5NP6|1|Y|C|876
5NP6|1|Y|A|877
5NP6|1|Y|A|878
5NP6|1|Y|G|879
*
5NP6|1|Y|C|898
5NP6|1|Y|A|899
5NP6|1|Y|A|900
5NP6|1|Y|C|901
5NP6|1|Y|C|902
5NP6|1|Y|C|903
5NP6|1|Y|G|904

Current chains

Chain Y

23S ribosomal RNA

Nearby chains

Chain Z

5S ribosomal RNA; 5S rRNA

Chain k

50S ribosomal protein L16