IL_5NP6_188

3D structure

PDB id

5NP6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S structure prior to bypassing

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUAAGCC*GGUAUC

Length

13 nucleotides

Bulged bases

5NP6|1|Y|A|1205

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NP6|1|Y|G|1202
5NP6|1|Y|U|1203
5NP6|1|Y|A|1204
5NP6|1|Y|A|1205
5NP6|1|Y|G|1206
5NP6|1|Y|C|1207
5NP6|1|Y|C|1208
*
5NP6|1|Y|G|1238
5NP6|1|Y|G|1239
5NP6|1|Y|U|1240
5NP6|1|Y|A|1241
5NP6|1|Y|U|1242
5NP6|1|Y|C|1243

Current chains

Chain Y

23S ribosomal RNA

Nearby chains

Chain c

50S ribosomal protein L4

Chain j

50S ribosomal protein L15