IL_5NP6_197

3D structure

PDB id

5NP6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S structure prior to bypassing

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUGGGAGG*CGACCUUGAAAUACCAC

Length

25 nucleotides

Bulged bases

5NP6|1|Y|A|2171, 5NP6|1|Y|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NP6|1|Y|G|2121
5NP6|1|Y|U|2122
5NP6|1|Y|G|2123
5NP6|1|Y|G|2124
5NP6|1|Y|G|2125
5NP6|1|Y|A|2126
5NP6|1|Y|G|2127
5NP6|1|Y|G|2128
*
5NP6|1|Y|C|2161
5NP6|1|Y|G|2162
5NP6|1|Y|A|2163
5NP6|1|Y|C|2164
5NP6|1|Y|C|2165
5NP6|1|Y|U|2166
5NP6|1|Y|U|2167
5NP6|1|Y|G|2168
5NP6|1|Y|A|2169
5NP6|1|Y|A|2170
5NP6|1|Y|A|2171
5NP6|1|Y|U|2172
5NP6|1|Y|A|2173
5NP6|1|Y|C|2174
5NP6|1|Y|C|2175
5NP6|1|Y|A|2176
5NP6|1|Y|C|2177

Current chains

Chain Y

23S ribosomal RNA

Nearby chains