IL_5O60_123
3D structure
- PDB id
- 5O60 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.18 Å
Loop
- Sequence
- GCCC*GGAAGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5O60_123 not in the Motif Atlas
- Homologous match to IL_7A0S_104
- Geometric discrepancy: 0.593
- The information below is about IL_7A0S_104
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05192.5
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
5O60|1|B|G|30
5O60|1|B|C|31
5O60|1|B|C|32
5O60|1|B|C|33
*
5O60|1|B|G|51
5O60|1|B|G|52
5O60|1|B|A|53
5O60|1|B|A|54
5O60|1|B|G|55
5O60|1|B|C|56
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain F
- 50S ribosomal protein L5
- Chain P
- 50S ribosomal protein L18
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