IL_5O61_067

3D structure

PDB id

5O61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complete structure of the Mycobacterium smegmatis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

AG*CAUAUAU

Length

9 nucleotides

Bulged bases

5O61|1|A|U|1730

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5O61_067 not in the Motif Atlas

Homologous match to IL_9DFE_060

Geometric discrepancy: 0.4817

The information below is about IL_9DFE_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46086.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

1

Unit IDs

5O61|1|A|A|1702
5O61|1|A|G|1703
*
5O61|1|A|C|1726
5O61|1|A|A|1727
5O61|1|A|U|1728
5O61|1|A|A|1729
5O61|1|A|U|1730
5O61|1|A|A|1731
5O61|1|A|U|1732

Current chains

Chain A

23S rRNA

Nearby chains