IL_5O61_173
3D structure
- PDB id
- 5O61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the Mycobacterium smegmatis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- UG*CAA
- Length
- 5 nucleotides
- Bulged bases
- 5O61|1|BA|A|1177
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5O61_173 not in the Motif Atlas
- Homologous match to IL_5J7L_049
- Geometric discrepancy: 0.1667
- The information below is about IL_5J7L_049
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
5O61|1|BA|U|1040
5O61|1|BA|G|1041
*
5O61|1|BA|C|1176
5O61|1|BA|A|1177
5O61|1|BA|A|1178
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BC
- 30S ribosomal protein S3
- Chain BE
- 30S ribosomal protein S5
- Chain BI
- 30S ribosomal protein S9
- Chain BJ
- 30S ribosomal protein S10
- Chain BN
- 30S ribosomal protein S14 type Z
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