IL_5OOM_021

3D structure

PDB id

5OOM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.03 Å

Loop

Sequence

CUCCG*CUCAUAAG

Length

13 nucleotides

Bulged bases

5OOM|1|A|C|2331, 5OOM|1|A|A|2446

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OOM|1|A|C|2329
5OOM|1|A|U|2330
5OOM|1|A|C|2331
5OOM|1|A|C|2332
5OOM|1|A|G|2333
*
5OOM|1|A|C|2441
5OOM|1|A|U|2442
5OOM|1|A|C|2443
5OOM|1|A|A|2444
5OOM|1|A|U|2445
5OOM|1|A|A|2446
5OOM|1|A|A|2447
5OOM|1|A|G|2448

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain O

39S ribosomal protein L17, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial