IL_5OOM_026

3D structure

PDB id

5OOM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.03 Å

Loop

Sequence

ACGAGAC*GUAU

Length

11 nucleotides

Bulged bases

5OOM|1|A|U|3100

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OOM|1|A|A|2717
5OOM|1|A|C|2718
5OOM|1|A|G|2719
5OOM|1|A|A|2723
5OOM|1|A|G|2724
5OOM|1|A|A|2725
5OOM|1|A|C|2726
*
5OOM|1|A|G|2934
5OOM|1|A|U|3100
5OOM|1|A|A|3101
5OOM|1|A|U|3102

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain E

39S ribosomal protein L3, mitochondrial

Chain F

39S ribosomal protein L4, mitochondrial