IL_5OT7_013
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UAGUUG*CAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5OT7_013 not in the Motif Atlas
- Homologous match to IL_6CZR_357
- Geometric discrepancy: 0.4213
- The information below is about IL_6CZR_357
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5OT7|1|1|U|249
5OT7|1|1|A|250
5OT7|1|1|G|251
5OT7|1|1|U|252
5OT7|1|1|U|253
5OT7|1|1|G|254
*
5OT7|1|1|C|272
5OT7|1|1|A|273
5OT7|1|1|A|274
5OT7|1|1|G|275
Current chains
- Chain 1
- 16S Ribosomal RNA
Nearby chains
- Chain 4
- Large subunit ribosomal RNA; LSU rRNA
- Chain P
- 30S ribosomal protein S17
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