IL_5OT7_018
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGAAGAAGC*GUGUAAAC
- Length
- 17 nucleotides
- Bulged bases
- 5OT7|1|1|A|412
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5OT7_018 not in the Motif Atlas
- Homologous match to IL_6CZR_129
- Geometric discrepancy: 0.2526
- The information below is about IL_6CZR_129
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58819.1
- Basepair signature
- cWW-L-R-tWH-R-L-tHW-tSS-R-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
5OT7|1|1|G|409
5OT7|1|1|G|410
5OT7|1|1|A|411
5OT7|1|1|A|412
5OT7|1|1|G|413
5OT7|1|1|A|414
5OT7|1|1|A|415
5OT7|1|1|G|416
5OT7|1|1|C|417
*
5OT7|1|1|G|426
5OT7|1|1|U|427
5OT7|1|1|G|428
5OT7|1|1|U|429
5OT7|1|1|A|430
5OT7|1|1|A|431
5OT7|1|1|A|432
5OT7|1|1|C|433
Current chains
- Chain 1
- 16S Ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S4
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