IL_5OT7_030

3D structure

PDB id

5OT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation factor G-ribosome complex captures in the absence of inhibitors.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAAUUCC*GGAGGAAC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OT7|1|1|G|673
5OT7|1|1|G|674
5OT7|1|1|A|675
5OT7|1|1|A|676
5OT7|1|1|U|677
5OT7|1|1|U|678
5OT7|1|1|C|679
5OT7|1|1|C|680
*
5OT7|1|1|G|710
5OT7|1|1|G|711
5OT7|1|1|A|712
5OT7|1|1|G|713
5OT7|1|1|G|714
5OT7|1|1|A|715
5OT7|1|1|A|716
5OT7|1|1|C|717

Current chains

Chain 1

16S Ribosomal RNA

Nearby chains

Chain E

30S ribosomal protein S6

Chain J

30S ribosomal protein S11

Chain Q

30S ribosomal protein S18

Chain g

50S ribosomal protein L2