3D structure

PDB id
5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongation factor G-ribosome complex captures in the absence of inhibitors.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GAAAGCGUG*CACGCCC
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5OT7|1|1|G|765
5OT7|1|1|A|766
5OT7|1|1|A|767
5OT7|1|1|A|768
5OT7|1|1|G|769
5OT7|1|1|C|770
5OT7|1|1|G|771
5OT7|1|1|U|772
5OT7|1|1|G|773
*
5OT7|1|1|C|806
5OT7|1|1|A|807
5OT7|1|1|C|808
5OT7|1|1|G|809
5OT7|1|1|C|810
5OT7|1|1|C|811
5OT7|1|1|C|812

Current chains

Chain 1
16S Ribosomal RNA

Nearby chains

Chain 4
Large subunit ribosomal RNA; LSU rRNA
Chain N
30S ribosomal protein S15
Chain g
50S ribosomal protein L2

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