IL_5OT7_047

3D structure

PDB id

5OT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation factor G-ribosome complex captures in the absence of inhibitors.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGGAUUGG*CAUGAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OT7|1|1|C|1303
5OT7|1|1|G|1304
5OT7|1|1|G|1305
5OT7|1|1|A|1306
5OT7|1|1|U|1307
5OT7|1|1|U|1308
5OT7|1|1|G|1309
5OT7|1|1|G|1310
*
5OT7|1|1|C|1328
5OT7|1|1|A|1329
5OT7|1|1|U|1330
5OT7|1|1|G|1331
5OT7|1|1|A|1332
5OT7|1|1|A|1333
5OT7|1|1|G|1334

Current chains

Chain 1

16S Ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S13

Chain R

30S ribosomal protein S19

Chain T

30S ribosomal protein Thx

Chain Z

50S ribosomal protein L31