IL_5OT7_098
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGG*UGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5OT7_098 not in the Motif Atlas
- Geometric match to IL_4V9K_064
- Geometric discrepancy: 0.2236
- The information below is about IL_4V9K_064
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 214
Unit IDs
5OT7|1|4|C|1040
5OT7|1|4|G|1041
5OT7|1|4|G|1042
*
5OT7|1|4|U|1113
5OT7|1|4|G|1114
5OT7|1|4|G|1115
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain 6
- 50S ribosomal protein L25
- Chain e
- 50S ribosomal protein L36
- Chain k
- 50S ribosomal protein L6
- Chain l
- Ribosomal protein uL10
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