IL_5OT7_101
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGUUG*CAUCC
- Length
- 10 nucleotides
- Bulged bases
- 5OT7|1|4|U|1061
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5OT7_101 not in the Motif Atlas
- Homologous match to IL_5J7L_384
- Geometric discrepancy: 0.5787
- The information below is about IL_5J7L_384
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_33835.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
5OT7|1|4|G|1058
5OT7|1|4|G|1059
5OT7|1|4|U|1060
5OT7|1|4|U|1061
5OT7|1|4|G|1062
*
5OT7|1|4|C|1076
5OT7|1|4|A|1077
5OT7|1|4|U|1078
5OT7|1|4|C|1079
5OT7|1|4|C|1080
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain 6
- 50S ribosomal protein L25
- Chain l
- Ribosomal protein uL10
- Chain m
- Ribosomal protein uL11
- Chain r
- 50S ribosomal protein L16
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