IL_5OT7_142

3D structure

PDB id

5OT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation factor G-ribosome complex captures in the absence of inhibitors.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGUCGC*GCGGC

Length

11 nucleotides

Bulged bases

5OT7|1|4|U|2102, 5OT7|1|4|G|2104, 5OT7|1|4|G|2186

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OT7|1|4|G|2100
5OT7|1|4|G|2101
5OT7|1|4|U|2102
5OT7|1|4|C|2103
5OT7|1|4|G|2104
5OT7|1|4|C|2105
*
5OT7|1|4|G|2184
5OT7|1|4|C|2185
5OT7|1|4|G|2186
5OT7|1|4|G|2187
5OT7|1|4|C|2188

Current chains

Chain 4

23S Ribosomal RNA

Nearby chains

Chain f

50S ribosomal protein L1